Protocols

COE specifications

Information


Unique identifier OMICS_10102
Name COE
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Windows
Programming languages C++
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Wei Wang

Information


Unique identifier OMICS_10102
Name COE
Interface Web user interface
Restrictions to use None
Programming languages C++
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Wei Wang

Publications for COE

COE citations

 (2)
library_books

eQTL Epistasis – Challenges and Computational Approaches

2013
Front Genet
PMCID: 3668133
PMID: 23755066
DOI: 10.3389/fgene.2013.00051

[…] k cells transforms the previous multi-dimensional into a one-dimensional model whose predictive power is finally tested by cross-validation. FastChi (Zhang et al., ), Fast ANOVA (Zhang et al., ), and COE (Zhang et al., ) use upper bounds to efficiently calculate corresponding test statistics, drastically limiting the search space. Other models include methods that are based on information theoreti […]

call_split

Chapter 10: Mining Genome Wide Genetic Markers

2012
PLoS Comput Biol
PMCID: 3531292
PMID: 23300418
DOI: 10.1371/journal.pcbi.1002828
call_split See protocol

[…] ssociation with the phenotype. FastANOVA is an algorithm for two-locus ANOVA (analysis of variance) test on quantitative traits and FastChi for two-locus chi-square test on case-control phenotypes. COE is a general method that can be applied in a wide range of tests. TEAM is designed for studies involving a large number of individuals such as human studies. In this subsection, we will discuss […]

COE institution(s)
Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA

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