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Coev2Net specifications

Information


Unique identifier OMICS_11015
Name Coev2Net
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Bonnie Berger

Publication for Coev2Net

Coev2Net citation

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Exploration of the Dynamic Properties of Protein Complexes Predicted from Spatially Constrained Protein Protein Interaction Networks

2014
PLoS Comput Biol
PMCID: 4038459
PMID: 24874694
DOI: 10.1371/journal.pcbi.1003654

[…] matrix for all 18 proteins is shown in and supplementary . when proteomic data are unavailable from other experimental sources, predicted protein-protein interactions, such as those obtained from coev2net can be used as input data to the algorithm., in order to investigate the possible conformational states embedded within the extended arp2/3, we generated an ensemble of 20,480 different […]


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Coev2Net institution(s)
Computer Science and Artificial Intelligence Laboratory, MIT, Cambridge, MA, USA; Toyota Technological Institute, Chicago, IL, USA; Department of Genetics, Harvard Medical School, Boston, MA, USA; Otto-Warburg Laboratory, Max Planck Institute for Molecular Genetics, Berlin, Germany; Howard Hughes Medical Institute, Boston, MA, USA; Computational Biology group, Biogen Idec, Cambridge, MA, USA; Department of Mathematics, MIT, Cambridge, MA, USA
Coev2Net funding source(s)
Funding for this work was provided by the NIH (grant number R01GM081871, R01DK088718) and HHMI.

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