Cofactory pipeline

Cofactory specifications

Information


Unique identifier OMICS_16373
Name Cofactory
Interface Web user interface
Restrictions to use None
Input data The protein sequence.
Input format FASTA
Output data The protein features.
Output format Textual format
License Other
Computer skills Basic
Version 1.0
Stability Stable
Source code URL http://www.cbs.dtu.dk/services/doc/cofactory-1.0.readme
Maintained Yes

Documentation


Maintainer


  • person_outline Thomas Nordahl Petersen <>

Information


Unique identifier OMICS_16373
Name Cofactory
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data The protein sequence.
Input format FASTA
Output data The protein features.
Output format Textual format
Operating system Unix/Linux
License Other
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes

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Versioning


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Documentation


Maintainer


  • person_outline Thomas Nordahl Petersen <>

Publication for Cofactory

Cofactory citation

2015
PMCID: 4498498

[…] on a specific family of enzymes, rather than an entire class or all those with a shared fold, is a more successful strategy for developing rules to switch cofactors., a recently described algorithm, cofactory (geertz-hansen et al., 2014), uses primary sequence information to predict the cofactor-binding specificities of rossmann folds. when we retrospectively entered the caadh sequence […]

Cofactory funding source(s)
This work was supported by Novo Nordisk Foundation and Novozymes A/S.

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