COFOLD specifications

Information


Unique identifier OMICS_09291
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Irmtraud M. Meyer <>

Information


Unique identifier OMICS_09291
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Irmtraud M. Meyer <>

COFOLD article

COFOLD citation

2014
PMCID: 4086097

[…] which may be partly protein-coding. simulfold simultaneously co-estimates the potentially pseudo-knotted conserved structure, alignment and phylogenetic tree for a set of homologous input sequences. cofold predicts the minimum-free energy structure for an input sequence while taking the effects of co-transcriptional folding into account, thereby greatly improving the prediction accuracy for long […]

COFOLD institution(s)
Centre for High-Throughput Biology, University of British Columbia, East Mall, Vancouver, BC, Canada; Department of Computer Science, University of British Columbia, East Mall, Vancouver, BC, Canada; Department of Medical Genetics, University of British Columbia, East Mall, Vancouver, BC, Canada

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