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CoLibri specifications

Information


Unique identifier OMICS_20179
Name CoLibri
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Windows
Computer skills Medium
Version 3.0
Stability Stable
Registration required Yes
Maintained Yes

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CoLibri in publications

 (203)
PMCID: 5928584
PMID: 29716652
DOI: 10.1186/s40478-018-0537-x

[…]  mm nacl, 2.5 mm kcl, 2 mm cacl2, 1.3 mm mgcl2,10 mm glucose, and 10 mm 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid with a 10x objective, at 3 hz acquisition using a zeiss cell observer with a colibri2 led system. movies were captured over 5 min. for each experiment, 4 fields were captured and 10 cell bodies were analyzed within each field. the average number of neurons in the fields of con […]

PMCID: 5893598
PMID: 29636490
DOI: 10.1038/s41598-018-23822-4

[…] gift from c. escudé (mnhn)., imaging was performed at the mima2 platform (http://www6.jouy.inra.fr/mima2) with an inverted zeiss axioobserver z1 microscope equipped with an apotome slider, a colibri light source, axiocam mrm camera and driven by the axiovision software 4.8.2. observations were carried out using a 63x oil-immersion objective. cells were scanned entirely using a z-distance […]

PMCID: 5882942
PMID: 29615803
DOI: 10.1038/s41598-018-23858-6

[…] ccd, and 100 x /1.4 oil immersion plan-apochromat lens at exposure times of 350 ms for phase contrast and 100 ms for fluorescence images. the light source used for fluorescence imaging was zeiss colibri.2. filters used for egfp and mcherry were zeiss 38he and semrock mcherry-b-000, respectively., bacterial cells were pregrown in lb for 18 h or in mm supplied with 5 mm 3cba for 72 h […]

PMCID: 5876329
PMID: 29599527
DOI: 10.1038/s41598-018-23690-y

[…] dna damage and repair induction by irradiation). slides were mounted using prolong® gold antifade with dapi (invitrogen). image acquisition used the zeiss apotome system on an axio-observer z.1 with colibri led illumination and appropriate emission filters. in all cases in which controls are compared with experimental manipulation of cells (for example using sirna), images […]

PMCID: 5868811
PMID: 29579078
DOI: 10.1371/journal.pone.0194540

[…] four different images were acquired for each sample and subsequently analysed with the metamorph software., sections were scanned by the axio scan.z1 slide scanner (zeiss, germany) equipped with a colibri illumination system and an orca flash 4.0 v2 camera. for each fluorophore, exposure settings were established on sections of two paediatric controls and the average value was used to acquire […]


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