Collective Analysis of Biological Interaction Networks statistics

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Collective Analysis of Biological Interaction Networks specifications

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Information

Unique identifier	OMICS_18809
Name	Collective Analysis of Biological Interaction Networks
Software type	Package/Module
Interface	Graphical user interface
Restrictions to use	None
Operating system	Unix/Linux
Programming languages	Java
Computer skills	Medium
Stability	No
Requirements	Cytoscape
Maintained	No

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Publication for Collective Analysis of Biological Interaction Networks

CABIN: collective analysis of biological interaction networks.

2007 Comput Biol Chem

PMID: 17500038

DOI: 10.1016/j.compbiolchem.2007.03.006

Collective Analysis of Biological Interaction Networks in publication

Network Inference Algorithms Elucidate Nrf2 Regulation of Mouse Lung Oxidative Stress

PMCID: 2516606

PMID: 18769717

DOI: 10.1371/journal.pcbi.1000166

[…] targets was conducted using a support vector machine classification algorithm to corroborate aracne and clr predictions. inferred networks were analyzed, compared, and integrated using the collective analysis of biological interaction networks (cabin) plug-in of cytoscape. using the two network inference algorithms and one machine learning algorithm, a number of both previously known […]

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Collective Analysis of Biological Interaction Networks institution(s)

Computational Biology and Bioinformatics, Pacific Northwest National Laboratory, Richland, WA, USA; Global Security Technologies and Policy, Pacific Northwest National Laboratory, Seattle, WA, USA

Collective Analysis of Biological Interaction Networks funding source(s)

Supported by LDRD Program at the Pacific Northwest National Laboratory and by the Department of Energy Office of Biological and Environmental Research’s Genomics: GTL program under contract 43930 and PNNL is operated by Battelle for the U.S. Department of Energy under Contract DE-AC06-76RL01830.

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