Colorectal cancer atlas specifications


Unique identifier OMICS_10347
Name Colorectal cancer atlas
Restrictions to use None
Database management system MySQL
Community driven No
Data access File download, Browse
User data submission Allowed
Version 1.0
Maintained Yes


  • Primates
    • Homo sapiens



  • person_outline Suresh Mathivanan

Publication for Colorectal cancer atlas

Colorectal cancer atlas citation


Hierridin B Isolated from a Marine Cyanobacterium Alters VDAC1, Mitochondrial Activity, and Cell Cycle Genes on HT 29 Colon Adenocarcinoma Cells

Mar Drugs
PMCID: 5039529
PMID: 27589771
DOI: 10.3390/md14090158

[…] cle/home), a dataset (GEO Accession: GSE36133) is available containing comparative microarrray data across cancer cell lines, but expression differences do not justify a different selectivity. In the Colorectal Cancer Atlas (, sequence variants are described for VDAC1 and STMN1 in HT29 and RKO cells. A sequence variance for VDAC1 in HT29 cells is at a splice site (p.G23_ […]

Colorectal cancer atlas institution(s)
Department of Computer Science and Information Technology, La Trobe University, Bundoora, VIC, Australia; Department of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia; The Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia; Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia; Faculty of Medicine, Dentistry and Health Sciences, Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia; Olivia Newton John Cancer Research Institute, Melbourne, VIC, Australia; Ludwig Institute for Cancer Research, Melbourne-Austin Branch, VIC, Australia; School of Cancer Medicine, La Trobe University, Melbourne, VIC, Australia; Genome Institute of Singapore, A*STAR, Singapore, Singapore
Colorectal cancer atlas funding source(s)
This work was supported by Australian NH&MRC fellowship [1016599] and Ramaciotti Establishment grant.

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