COMER pipeline

COMER specifications


Unique identifier OMICS_26673
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C, C++, Shell (Bash)
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.4.2
Stability Stable
Maintained Yes



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  • person_outline Mindaugas Margelevicius <>

Additional information

Publication for COMER

COMER citation

PMCID: 3396124

[…] performed. equilibrium all-atom md simulations for α-hl/membrane systems were run for 25 ns with the npt ensemble using the namd 2.7b1 program45 package using a previously developed protocol from comer et al.46 the total number of atoms for md simulations is ∼270 000. briefly, the all-atom system contains α-hl toxin embedded into a popc (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine) […]

COMER institution(s)
Institute of Biotechnology, Life Sciences Center, Vilnius University, Vilnius, Lithuania

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