CommFinder statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Gene co-expression prediction chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

CommFinder specifications

Information


Unique identifier OMICS_26405
Name CommFinder
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Medium
Stability Stable
Requirements
Cytoscape
Maintained Yes

Download


Versioning


Add your version

Maintainers


  • person_outline Jianhua Ruan <>
  • person_outline Weixiong Zhang <>
  • person_outline Saleh Tamim <>

Additional information


http://www.cs.utsa.edu/~jruan/software/commFinder/CommFinder_UserManual.htm http://cs.utsa.edu/~jruan/Software.html

Publication for CommFinder

CommFinder in publication

PMCID: 4607977
PMID: 26470848
DOI: 10.1038/srep15258

[…] exported each network to cytoscape software. network analysis was conducted with the networkanalyzer plugin to calculate the network topological parameters. network modularity was calculated by the commfinder plugin in cytoscape. the network topological parameters and modularity are listed in ., zsummary is an integrated statistic implemented in functional module preservation in the wgcna r […]


To access a full list of publications, you will need to upgrade to our premium service.

CommFinder institution(s)
Department of Computer Science, The University of Texas at San Antonio, One UTSA Circle, San Antonio, TX, USA; Department of Computer Science and Engineering, Washington University in St Louis, St Louis, MO, USA
CommFinder funding source(s)
Supported in part by a UTSA faculty research award and a grant from the National Institute of General Medical Sciences (Award Number SC3GM086305), and NSF grants (IIS-0535257 and DBI0743797) and NIH grants (RC1AR05868101 and U54AI05716006S1).

CommFinder reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review CommFinder