CommFinder statistics

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Associated diseases

Associated diseases

CommFinder specifications


Unique identifier OMICS_26405
Name CommFinder
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Medium
Stability Stable
Maintained Yes



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  • person_outline Jianhua Ruan <>
  • person_outline Weixiong Zhang <>
  • person_outline Saleh Tamim <>

Additional information

Publication for CommFinder

CommFinder in publication

PMCID: 4607977
PMID: 26470848
DOI: 10.1038/srep15258

[…] exported each network to cytoscape software. network analysis was conducted with the networkanalyzer plugin to calculate the network topological parameters. network modularity was calculated by the commfinder plugin in cytoscape. the network topological parameters and modularity are listed in ., zsummary is an integrated statistic implemented in functional module preservation in the wgcna r […]

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CommFinder institution(s)
Department of Computer Science, The University of Texas at San Antonio, One UTSA Circle, San Antonio, TX, USA; Department of Computer Science and Engineering, Washington University in St Louis, St Louis, MO, USA
CommFinder funding source(s)
Supported in part by a UTSA faculty research award and a grant from the National Institute of General Medical Sciences (Award Number SC3GM086305), and NSF grants (IIS-0535257 and DBI0743797) and NIH grants (RC1AR05868101 and U54AI05716006S1).

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