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Common-neighbors based GRAph ALigner C-GRAAL

Online

Uses heuristics for maximizing the number of aligned edges between two networks and is based solely on network topology. As such, it can be applied to any type of network, such as social, transportation, or electrical networks. C-GRAAL can be used to align human-pathogen inter-species PPI networks and that it can identify patterns of pathogen interactions with host proteins solely from network topology.

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C-GRAAL forum

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C-GRAAL classification

C-GRAAL specifications

Software type:
Package/Module
Restrictions to use:
None
Computer skills:
Advanced
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux
Stability:
Stable

C-GRAAL distribution

versioning

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No versioning.

Credits

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Publications

Institution(s)

Department of Computer Science, University of California, Irvine, Irvine, CA, USA

Link to literature

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