Comparative genome analysis software tools and databases

Comparative genomics steps

Bioinformatics tools

Databases

Comparative genome analysis software tools and databases

Most Recent Tools

Ortholuge
Desktop

Ortholuge

Improves the specificity of ortholog identification and is suitable for…

Improves the specificity of ortholog identification and is suitable for high-throughput use. Ortholuge provides important data set evaluation for a variety of analyses based on comparative…

PARALIGN
Desktop
Web

PARALIGN

Uses for the identification of distantly related sequences in both nucleotide…

Uses for the identification of distantly related sequences in both nucleotide and amino acid sequence databases. PARALIGN is a rapid and sensitive similarity search tool designed to run efficiently…

dotmatcher
Web

dotmatcher

Generates a dotplot from two input sequences. The dotplot products by…

Generates a dotplot from two input sequences. The dotplot products by dotmatcher is an intuitive graphical representation of the regions of similarity between two sequences. All positions from the…

seqinr
Desktop

seqinr

Explores data analysis and data visualization for biological sequence (DNA and…

Explores data analysis and data visualization for biological sequence (DNA and protein) data. Seqinr includes utilities for sequence data management under the ACNUC system. It offers a vectorized…

Most Popular Tools

HAlign
Cloud

HAlign

A package of multi-platform Java software tools, which aimed at large scale…

A package of multi-platform Java software tools, which aimed at large scale multiple similar DNA/RNA sequence alignment. HAlign employs center star multiple sequence alignment strategy. The input…

AliView
Desktop

AliView

An alignment viewer and editor designed to meet the requirements of…

An alignment viewer and editor designed to meet the requirements of next-generation sequencing era phylogenetic datasets. AliView handles alignments of unlimited size in the formats most commonly…

GenPlay
Desktop

GenPlay

An analyzer and browser for high-throughput data. GenPlay recognizes a wide…

An analyzer and browser for high-throughput data. GenPlay recognizes a wide variety of common genomic data formats from microarray- or sequencing-based platforms and offers a library of operations…

TnT
Library

TnT

A set of libraries aimed at creating powerful tree- and track-based…

A set of libraries aimed at creating powerful tree- and track-based visualisations for the web. Its modularity and rich API facilitate the development of many different visualisations ranging from…

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