Comparative genomics applications Sequence alignment visualization 23 tools Ultraconserved sequence data 12 tools Multiple sequence alignment quality control 9 tools Whole genome alignment 14 tools Pairwise sequence alignment 13 tools Multiple sequence alignment 44 tools Maximal exact matches 4 tools Gene structure comparison data 5 tools Pangenomics 21 tools Orthology prediction 47 tools Sequence homology search 20 tools Sequence logo generation 9 tools Metagenomic data 7 tools Comparative genome visualization 30 tools