CompGO specifications

Information


Unique identifier OMICS_09877
Name CompGO
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.16.0
Stability Stable
Requirements
RDAVIDWebService
Maintained Yes

Versioning


No version available

Documentation


Maintainer


  • person_outline Ashley J. Waardenberg

Publication for CompGO

CompGO citation

library_books

Genome wide analysis of E. coli cell gene interactions

2017
BMC Syst Biol
PMCID: 5701387
PMID: 29169395
DOI: 10.1186/s12918-017-0494-1

[…] ngst the strains populating these regions []. Functional terms passing both a p-value (p < 0.1) and a Z-score (z > 0.5) threshold were defined as differentially enriched (Fig. ) (Bioconductor package CompGO, Additional file ).The S high – E high region harbored strains deleted of key bacterial growth functions including cell division and important housekeeping cytosolic cellular processes (GO:0009 […]

CompGO institution(s)
Victor Chang Cardiac Research Institute, Darlinghurst, NSW, Australia

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