Offers a platform dedicated to the analysis of low-complexity regions in long sequences. Complexity is an application that provides multiple methods: (i) by frequency of nucleotide content; (ii) by entropy of the given order of words (oligonucleotides); or (iii) by linguistic complexity. The application is able to build several complexity profiles simultaneously as well as generate a profile from either a long sequence or a group of shorter sequences.
Institute of Mathematics SB RAS, Novosibirsk, Russia; Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia
Complexity funding source(s)
Supported in part by the RFBR (02-07-90355, 03-07-96833, 03-04-48506), the Russian Ministry of Education (E 02-6.0-250), Ministry of Industry, Science and Technology (43.073.1.1.1S01), NATO (LST.CLG 979815) MCB RAS (No. 10.4) and SB RAS (Integration project no. 119).