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compleXView specifications

Information


Unique identifier OMICS_18374
Name compleXView
Interface Web user interface
Restrictions to use None
Input data Some protein identifiers.
Input format UniProt
Output data The ID of the bait, the ID of the prey and the ratio of the prey over the bait abundance in percentage.
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Franz Herzog

Publication for compleXView

compleXView citation

library_books

Inference of gene interaction networks using conserved subsequential patterns from multiple time course gene expression datasets

2015
BMC Genomics
PMCID: 4682423
PMID: 26681650
DOI: 10.1186/1471-2164-16-S12-S4

[…] with 57 proteins, mitochondrial ribosomal large subunit with 44 proteins, and mitochondrial ribosomal small subunit with 32 proteins--are downloaded from http://yeast-complexes.russelllab.org/complexview.pl?rm=download. they respectively have 38, 18, 24 and 17 proteins in the time-series datasets. for each complex, we get a subnetwork only with those edges whose proteins […]


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compleXView institution(s)
Gene Center and Department of Biochemistry, Ludwig-Maximilians-Universitat Munchen, Munich, Germany
compleXView funding source(s)
Supported by LMUexcellent Initiative, the Bavarian Research Center of Molecular Biosystems; German Excellence Initiative (Graduate School QBM); German Research Foundation [GRK1721], the European Research Council [MolStruKT StG no. 638218]; Human Frontier Science Program Research Grant [RGP0008/2015].

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