Companion specifications

Information


Unique identifier OMICS_11698
Name COMprehensive Parasite ANnotatION
Interface Web user interface
Restrictions to use None
Input data Scaffold sequences or a reference (from our set of 62 species)
Input format FASTA, EMBL, GenBank
Output data Annotation results and product annotations
Output format GFF3 format for gene model and GAF format for GO associations
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Sascha Steinbiss <>

Information


Unique identifier OMICS_11698
Name COMprehensive Parasite ANnotatION
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data Scaffold sequences or a reference (from our set of 62 species)
Input format FASTA, EMBL, GenBank
Output data Annotation results and product annotations
Output format GFF3 format for gene model and GAF format for GO associations
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Requirements Nextflow
Maintained Yes

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Maintainer


  • person_outline Sascha Steinbiss <>

Companion article

Companion institution(s)
Parasite Genomics, Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK; Institute of Integrative Biology, University of Liverpool, Liverpool, UK; Department of Biology, University of Pennsylvania, Philadelphia, PA, USA; Parasite Genomics, Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK
Companion funding source(s)
Wellcome Trust (WT099198MA and WT098051)

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