Computel specifications

Information


Unique identifier OMICS_12432
Name Computel
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data Computel takes whole-genome NGS short-reads as input.
Operating system Unix/Linux, Windows
Programming languages R
Computer skills Advanced
Version 0.2
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Arsen Arakelyan <>

Publication for Computel

Computel in publication

PMCID: 5840683
PMID: 29568807
DOI: 10.21956/wellcomeopenres.13568.r26482

[…] to make illumina libraries which were sequenced on four lanes of hiseq x in 151 bp paired-end mode. sequence data were deposited in ena under accession erp016250. fastq files were analysed using computel (v0.3, options: -proc 4 -nchr 25 -lgenome 1371719383 -pattern ttaggg). fastq files were also aligned to the zv9 reference genome using bwa (v0.7.15, options: mem -t 14 -p -y -k 100000000) […]


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Computel institution(s)
Group of Bioinformatics of the Institute of Molecular Biology of the National Academy of Sciences of the Republic of Armenia, Yerevan, Armenia

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