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Protocols

Conclustador specifications

Information


Unique identifier OMICS_11509
Name Conclustador
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Version 0.4
Stability Alpha
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Jessica W. Leigh <>

Publication for Conclustador

Conclustador citations

 (2)
call_split

Clustering Genes of Common Evolutionary History

2016
PMCID: 4868114
PMID: 26893301
DOI: 10.1093/molbev/msw038
call_split See protocol

[…] data, and an internal node represents the consensus of its child trees. the meta-tree is inferred from intertree distances using an algorithm analogous to neighbor joining ()., similarly, conclustador () uses intertree distances as a basis for clustering. trees are compared using a novel euclidean distance among bipartitions weighted by bootstrap support, and for clustering leigh et […]

library_books

A congruent phylogenomic signal places eukaryotes within the Archaea

2012
PMCID: 3497233
PMID: 23097517
DOI: 10.1098/rspb.2012.1795

[…] result in serious systematic error []. to account for these difficulties, we used two complementary methods to test the congruence of these information-processing genes: concaterpillar [] and conclustador []. interestingly, the two methods disagreed on the level of incongruence in our protein datasets: conclustador, which uses spectral clustering of euclidean distances to define sets […]


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Conclustador institution(s)
Department of Mathematics and Statistics, University of Otago, Dunedin, New Zealand; UMR CNRS 7138 Systématique, Adaptation, Evolution, Université Pierre et Marie Curie, Paris, France

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