Consan specifications
Information
| Unique identifier | OMICS_11353 |
|---|---|
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux |
| Programming languages | C |
| License | GNU General Public License version 2.0 |
| Computer skills | Advanced |
| Version | 1.2 |
| Stability | Stable |
| Maintained | Yes |
Versioning
Add your version
Maintainer
- person_outline Robin Dowell <>
Consan article
library_books
Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints.
2006 BMC Bioinformatics
PMID: 16952317
DOI: 10.1186/1471-2105-7-400
Consan citation
library_books
Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign
2007
PMCID: 1868766
[…] subset of the free energy nearest neighbor parameters [33]. the revised foldalign restricts the alignment space to reduce runtime. two scfg-based programs are available, stemloc package [11,12] and consan [34]. to reduce runtime, stemloc introduced the concept of fold and alignment envelopes that restrict, respectively, the search space for possible base pairs and possible nucleotide […]
Consan institution(s)
Howard Hughes Medical Institute and Department of Genetics, Washington University School of Medicine, St Louis, MO, USA; MIT Computer Science and Artificial Intelligence Laboratory, Cambridge, MA, USA
Consan reviews
Be the first to review Consan
