Consensus Clustering statistics

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Consensus Clustering specifications

Information


Unique identifier OMICS_23698
Name Consensus Clustering
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Stability Stable
Maintained Yes

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Publication for Consensus Clustering

Consensus Clustering in publications

 (60)
PMCID: 5882098
PMID: 29614076
DOI: 10.1371/journal.pone.0192726

[…] tissue pathology in patients without pre-existing heart failure., to determine whether the misclassified patients reproducibly clustered with the incorrect class, we used unsupervised clustering. consensus clustering is an unsupervised clustering and resampling technique that provides a visual and quantitative measure of the number and stability of discrete classes in a dataset []. […]

PMCID: 5843664
PMID: 29520031
DOI: 10.1038/s41467-018-03121-2

[…] where ∩ denotes intersection between altered proteomes i and j, and ⋃ denotes union between altered proteomes iand j., consensus clustering was performed using the r package consensusclusterplus. samples were clustered using euclidean distance as the distance measure. a total of 2538 proteins in d6 were used […]

PMCID: 5643431
PMID: 29038551
DOI: 10.1038/s41598-017-13196-4

[…] between the survival curves of the two groups. unsupervised hierarchical clustering of cases using the 9 vfs divided the cohort into two clusters (fig. ) and the number of clusters was confirmed by consensus clustering (fig. ). cases within these clusters had a significantly different dfs probability by kaplan-meier analysis (log-rank p = 0.019, hr = 2.4, 95% c.i. = 1.1–5.2; fig. ). the 9 vfs […]

PMCID: 5630612
PMID: 28986564
DOI: 10.1038/s41598-017-12993-1

[…] dominant patterns of brain activity that provide implicit representations of voxel-wise dfc matrices. the temporal redundancy of these dominant patterns across windows was then exploited using consensus clustering, leading to a limited number of 6 representative dominant patterns. these rdps were expressed uniformly across subjects. then, for each voxel, we assigned a label based […]

PMCID: 5594508
PMID: 28893210
DOI: 10.1186/s12885-017-3568-y

[…] therapies., to identify the molecular subtypes of ulms, we collected and analyzed expression profile data sets from tcga database and determined the optimal number of molecular subtypes of ulms by consensus clustering (r package, consensusclusteringplus []). the accuracy of subtype assignments was evaluated by silhouette analysis (r package cluster []). the subtype-specific gene expression […]


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Consensus Clustering institution(s)
Whitehead Institute/MIT Center for Genome Research, Cambridge, MA, USA

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