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CCDS | Identifying a common protein-coding gene set for the human and mouse genomes


Tracks identical protein annotations on the reference mouse and human genomes with a stable identifier. CCDS is a resource that supports consistent, comprehensive annotation of the protein-coding content of the human and mouse genomes. It is built by consensus; each member of the collaboration contributes annotation, quality assessments, and curation. This data sets can be accessed from several public resource.

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CCDS classification

  • Animals
    • Homo sapiens
    • Mus musculus

CCDS specifications

Unique identifier:
Restrictions to use:
Data access:
File download, Browse
Consensus Coding Sequence
Community driven:
User data submission:
Not allowed

CCDS support


  • Terence D. Murphy <>


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National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, UK; University of California Santa Cruz Genomics Institute, Santa Cruz, CA, USA; Mouse Genome Informatics, The Jackson Laboratory, Bar Harbor, ME, USA; HUGO Gene Nomenclature Committee, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, UK

Funding source(s)

Supported by the Intramural Research Program of the National Institutes of Health, National Library of Medicine, the Wellcome Trust [WT098051, WT108749/Z/15/Z], the National Human Genome Research Institute (NHGRI) [U41HG007234, 2U41HG007234], the European Molecular Biology Laboratory, an NHGRI grant [U41HG003345], a Wellcome Trust grant [099129/Z/12/Z], an NHGRI grant [U41HG000330] and the NHGRI grant for the GENCODE project [U41HG007234].

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