ConTra specifications

Unique identifier:
OMICS_09258
Interface:
Web user interface
Output data:
A list of PWMs for the exploration part and alignment blocks for the visualization part.
Database management system:
MySQL
Version:
3
Maintained:
Yes
Name:
conserved TFBSs
Restrictions to use:
None
Programming languages:
Perl, R
Computer skills:
Basic
Stability:
Stable
  • Animals
    • Bos taurus
    • Caenorhabditis elegans
    • Danio rerio
    • Drosophila melanogaster
    • Gallus gallus
    • Homo sapiens
    • Mus musculus
    • Xenopus tropicalis
  • Fungi
    • Saccharomyces cerevisiae

ConTra support

Documentation

Maintainer

  • Pieter De Bleser <>

Additional information

http://bioit2.irc.ugent.be/contra/v3/#/help

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Publications

Institution(s)

VIB Bioinformatics Core, Zwijnaarde-Ghent, Belgium; VIB-UGent Center for Inflammation Research, Zwijnaarde-Ghent, Belgium; Department of Biomedical Molecular Biology, Ghent University, Zwijnaarde-Ghent, Belgium; Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium

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