ContaMiner specifications

Unique identifier:
OMICS_14484
Restrictions to use:
None
Input format:
CIF, MTZ
Programming languages:
Shell (Bash)
Computer skills:
Basic
Source code URL:
https://codeload.github.com/StruBE-KAUST/ContaMiner/zip/master
Interface:
Web user interface
Input data:
The (merged and scaled) diffraction data file
Output data:
Summarizes the MoRDa scores from all MR trials, and infers the likelihood of each individual contaminant being a solution.
License:
GNU General Public License version 2.0
Stability:
Stable
Maintained:
Yes

ContaMiner specifications

Unique identifier:
OMICS_14484
Interface:
Command line interface
Input data:
The (merged and scaled) diffraction data file
Output data:
Summarizes the MoRDa scores from all MR trials, and infers the likelihood of each individual contaminant being a solution.
Programming languages:
Shell (Bash)
Computer skills:
Advanced
Source code URL:
https://codeload.github.com/StruBE-KAUST/ContaMiner/zip/master
Software type:
Package/Module
Restrictions to use:
None
Input format:
CIF, MTZ
Operating system:
Unix/Linux
License:
GNU General Public License version 2.0
Stability:
Stable
Maintained:
Yes

versioning

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ContaMiner distribution

download

ContaMiner support

Maintainer

  • Stefan Arold <>
  • Stefan Arold <>

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Credits

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Publications

Institution(s)

King Abdullah University of Science and Technology, Center for Computational Bioscience Research, Division of Biological and Environmental Sciences and Engineering, Thuwal, Saudi Arabia; Fachbereich Biologie, Universität Konstanz, Konstanz, Germany

Funding source(s)

Supported by the King Abdullah University of Science and Technology through the baseline fund and the Office of Sponsored Research under award Nos. URF/1/1976-04 and URF/1/2602-01-01.

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