ContPro statistics

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Citations per year

Number of citations per year for the bioinformatics software tool ContPro
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Tool usage distribution map

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Associated diseases

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Popular tool citations

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ContPro specifications

Information


Unique identifier OMICS_18982
Name ContPro
Interface Web user interface
Restrictions to use None
Input data A protein 3D coordinate file like PDB, modeled protein or a docked complex file.
Output data The uploaded file name and distance threshold selected for the calculations; the calculated distance between the two atoms, its residue, protein chain and the interacting atoms.
Programming languages Perl
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Ahmad Firoz

Publication for ContPro

ContPro citation

library_books

Computational analysis of protein protein interfaces involving an alpha helix: insights for terphenyl–like molecules binding

2013
PMCID: 3689098
PMID: 23768251
DOI: 10.1186/2050-6511-14-31

[…] lyze the sequence similarities we performed sequence alignment using the CLUSTALW software []. Interacting residues at the protein-protein interface in terms of contact distances were found using the ContPro online freely available tool []. We identified the protein residues interacting with the three key residues of the alpha-helical peptide (occupying positions i, i+3 and i+7 or i, i+4 and i+7) […]


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ContPro institution(s)
Biomedical Informatics Center, PGIMER, Chandigarh, India; Faculty of Pharmacy, Jamia Hamdard, New Delhi, India; Department of Nephrology, PGIMER, Chandigarh, India
ContPro funding source(s)
Supported by the Project “Biomedical Informatics Centre of ICMR”.

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