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Cookie Monster specifications

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Unique identifier OMICS_24976
Name Cookie Monster
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.1.3
Stability Stable
Maintained Yes

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http://www.sanger.ac.uk/science/tools/cookie-monster

Cookie Monster citations

 (7)
library_books

Genome wide analysis of gene regulation mechanisms during Drosophila spermatogenesis

2018
PMCID: 5879934
PMID: 29609617
DOI: 10.1186/s13072-018-0183-3

[…] in many cell types., our study addresses the intricate interplay between tmac, ttaf, and mmb/dream during spermatogenesis. we used cell type-specific damid to build the dna-binding profiles of cookie monster (tmac), cannonball (ttaf), and mip40 (mmb/dream and tmac) proteins in male germline cells. incorporating the whole transcriptome analysis, we characterized the regulatory effects […]

library_books

Protecting and Diversifying the Germline

2018
PMCID: 5788515
PMID: 29378808
DOI: 10.1534/genetics.117.300208

[…] of meiotic cell cycle genes, the meiotic cell cycle cannot proceed until terminal differentiation genes are robustly transcribed (; )., the six known aly-class genes are always early (aly), cookie monster (comr), matotopetli (topi), tombola (tomb), achintya/vismay (achi/vis), and caf1 (). all of the aly-class genes, except achi/vis, are expressed exclusively in primary spermatocytes (; […]

library_books

Tempting food words activate eating simulations

2013
PMCID: 3829564
PMID: 24298263
DOI: 10.3389/fpsyg.2013.00838

[…] to systematically assess the occurrence of eating simulation features and other features in response to tempting and neutral food, and to distinguish these features from linguistic phrases (e.g., “cookie monster”) and category information, a specialized coding procedure was developed for the current study. in this novel coding procedure, features were coded as part of an eating simulation […]

library_books

Rapid Male Specific Regulatory Divergence and Down Regulation of Spermatogenesis Genes in Drosophila Species Hybrids

2013
PMCID: 3623997
PMID: 23593487
DOI: 10.1371/journal.pone.0061575

[…] for example, both bag of marbles (bam) and benign gonial cell neoplasm (bgcn) limit the number of mitotic divisions, allowing the transition from mitosis into meiosis, while always early (aly) and cookie monster (comr) are members of a class of genes known as meiotic arrest genes that are needed for the progression of meiosis and the start of spermiogenesis , , ., the fact that sperm cell […]

library_books

BmTGIF, a Bombyx mori Homolog of Drosophila DmTGIF, Regulates Progression of Spermatogenesis

2012
PMCID: 3494694
PMID: 23152760
DOI: 10.1371/journal.pone.0047861

[…] a few meiotic-arrest-class genes have been studied to date in drosophila, including always early (aly), cannonball (can), meiosis i arrest (mia), spermatocyte arrest (sa), no-hitter (nht), cookie monster (comr), achintya/vismay (achi/vis), matotopetli (topi) and tombola (tomb) , ., in the silkworm bombyx mori, spermatogenesis has been well studied at the ultrastructural level , . six […]

library_books

Transcriptional regulation during Drosophila spermatogenesis

2012
PMCID: 3469439
PMID: 23087835
DOI: 10.4161/spmg.21775

[…] genes, their functions ensure that the meiotic cell cycle does not proceed until terminal differentiation genes are robustly transcribed.,, the five known aly-class genes are always early (aly), cookie monster (comr), matotopetli (topi), tombola (tomb) and achintya/vismay (achi/vis). all of the aly-class genes, except achi/vis, are expressed exclusively in primary spermatocytes.-,, four […]


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