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COPid specifications

Information


Unique identifier OMICS_06622
Name COPid
Alternative name COmposition based Protein Identification
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for COmposition based Protein Identification

COPid in publications

 (3)
PMCID: 5671680
PMID: 29201907
DOI: 10.1155/2017/5170680

[…] per cell (mfi) was calculated for both the groups. the significance of the difference in intensity was determined by student's t-test., bioinformatic analysis of hdac6 was done using the mupro, copid, and predictprotein tools [–]., we determined the presence of hdac6 in multiple rat tissues, namely, testis, epididymis, prostrate, seminal vesicles, brain, adrenal, heart, lungs, liver, […]

PMCID: 5521120
PMID: 28732462
DOI: 10.1186/s12859-017-1758-x

[…] also, af descriptors such as the amino acid content and the amino-acid-pair-association rules, were used along with several classification methods to categorize protein sequences []. the web-server composition-based protein identification (copid) was developed to annotate the function of a full or partial protein strictly from its composition []., one of the most popular af protein features […]

PMCID: 2080774
PMID: 18043746
DOI: 10.1371/journal.pone.0001239

[…] per site, with a window length of 40 bp and a step size of 10 bp. estimates of the dipeptide compositions of tra proteins from different dipteran species were made using the services of the copid server (http://www.imtech.res.in/raghava/copid/index.html)., competing interests: the authors have declared that no competing interests exist., funding: this work was financed by grants […]


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COPid institution(s)
Institute ofMicrobial Technology, Chandigarh, India

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