CODEX specifications

Unique identifier:
OMICS_07305
Alternative name:
CODEX2
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 2.0
Stability:
Stable
Name:
COpy number Detection by EXome sequencing
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
R
Computer skills:
Advanced
Maintained:
Yes

versioning

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CODEX support

Documentation

Maintainers

  • Nancy Zhang <>
  • Yuchao Jiang <>
  • Yuchao Jiang <>

Additional information

http://www.bioconductor.org/packages/devel/bioc/html/CODEX.html

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Credits

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Publications

Institution(s)

Department of Biostatistics, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, NC, USA; Department of Genetics, School of Medicine, University of North Carolina, Chapel Hill, NC, USA; Division of Translational Medicine and Human Genetics, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Abramson Cancer Center, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Department of Statistics, The Wharton School, University of Pennsylvania, Philadelphia, PA, USA

Funding source(s)

Supported by the National Institutes of Health (NIH) grant R01 HG006137 and P01 CA142538.

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