1. Directory
  2. Fluxomics
  3. 13C-fluxomics
Join community Sign in
By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.

A tool for the detection of copy number aberrations from targeted sequencing. All currently available methods are based on exonic depth of coverage, and suffer from the problems that bait efficiencies are non-uniform and that exons are irregularly distributed over the genome. By exploiting the off-target sequence reads, CopywriteR bypasses these problems. It allows for extracting DNA copy number profiles of a high quality comparable to those of ‘dedicated’ techniques such as SNP array, arrayCGH and low-coverage whole-genome sequencing techniques.

Software type:
Package
Interface:
Command line interface
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
Programming languages:
R
Computer skills:
Advanced
Stability:
Stable
View all reviews

0 user review

No review has been posted.

View all issues

0 issue

No open issue.

Maintainer

  • Thomas Kuilman, Oscar Krijgsman

Institution(s)

Division of Molecular Oncology, Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX Amsterdam, The Netherlands

7 related tools