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CorGen specifications

Information


Unique identifier OMICS_24478
Name CorGen
Software type Application/Script
Interface Web user interface
Restrictions to use None
Input data A DNA sequence.
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Philipp Messer

Publication for CorGen

CorGen citations

 (4)
library_books

Comparative study of joint analysis of microarray gene expression data in survival prediction and risk assessment of breast cancer patients

2015
Brief Bioinform
PMCID: 5863785
PMID: 26504096
DOI: 10.1093/bib/bbv092

[…] r 5000) with 100 samples were generated. In one analysis, the genes had a constant pairwise correlation of 0.8, and in another analysis, they had no correlation with each other (correlation = 0). The corgen function in the R ecodist package was used to generate the gene expression values with a correlation (0 or 0.8 in this study). This function generates random values based on the rnorm function. […]

library_books

BiDaS: a web based Monte Carlo BioData Simulator based on sequence/feature characteristics

2013
Nucleic Acids Res
PMCID: 3692108
PMID: 23716644
DOI: 10.1093/nar/gkt420

[…] . However, fractions of nucleic acids have to be manually selected, while RNA/AA sequences are not supported. In addition, sequence lengths are randomly chosen without following a given distribution. CorGen () is a webserver application that generates sequences based on GC-content correlations. The user-defined input data are restricted to a single DNA sequence, while shorter sequences cannot be e […]

library_books

In Vitro Enzyme Assay of CYP21A2 Mutation (R483Q) by A Novel Method Using Liquid Chromatography Electrospray Ionization Tandem Mass Spectrometry (LC ESI MS/MS)

2008
PMCID: 4004923
PMID: 24790362
DOI: 10.1297/cpe.17.49

[…] s were fractionated in 10% sodium dodecylsulfate-polyacrylamide gel, transferred to polyvinylidene difluoride membranes (Millipore), and immunoblotted using the rabbit polyclonal anti-CYP21 antibody (Corgen) (1:5000) in 3% non-fat milk. The signals were detected by an ECL system (Amersham). […]

library_books

Regulation of Glycogen Synthase Kinase 3β Functions by Modification of the Small Ubiquitin Like Modifier

2008
PMCID: 2570553
PMID: 18949077
DOI: 10.2174/1874091X00802010067

[…] SUMO-1 conjugation assay was performed in vitro using the SUMO assay kit purchased from Corgen Inc (Taipei, Taiwan), according to the manufacturer’s recommended protocol. One microgram of purified GST-tagged GSK 3β mutants were mixed with 250 ng of Ubc9, 125 ng of Aos1/Uba2, with or with […]


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CorGen institution(s)
Max Planck Institute for Molecular Genetics, Berlin, Germany

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