corrplot pipeline

corrplot specifications

Information


Unique identifier OMICS_16308
Name corrplot
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.77
Stability Stable
Source code URL https://cran.r-project.org/src/contrib/corrplot_0.84.tar.gz
Maintained Yes

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Maintainer


  • person_outline Taiyun Wei <>

corrplot IN pipelines

 (3)
2017
PMCID: 5452374
PMID: 28569190
DOI: 10.1186/s12885-017-3385-3

[…] the first three components, because components 1 and 2 only explained 63% of the variance., correlation matrix plots of correlations between the different mrnas measured were constructed with the corrplot function supplied with the corrplot package in r; it used the cor function to compute correlations. the correlation matrix was computed separately for ctcs, epithelial pancreatic cancer cell […]

2017
PMCID: 5452374
PMID: 28569190
DOI: 10.1186/s12885-017-3385-3

[…] components 1 and 2 only explained 63% of the variance., correlation matrix plots of correlations between the different mrnas measured were constructed with the corrplot function supplied with the corrplot package in r; it used the cor function to compute correlations. the correlation matrix was computed separately for ctcs, epithelial pancreatic cancer cell lines, aspc-1 and panc1, […]

2013
PMCID: 3795667
PMID: 24146813
DOI: 10.1371/journal.pone.0076051

[…] to analyze the correlations between mirnas with significantly different expression (fdr < 0.01) between stimulated and sham-operated control animals. a correlation plot was generated with the corrplot package [37]., the fuzzy c-means algorithm implemented in the mfuzz package [38] was used to perform clusterization on all 292 probes that had expressions higher than the background. […]

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