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corrplot specifications

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Unique identifier OMICS_16308
Name corrplot
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.84
Stability Stable
Requirements
RColorBrewer, testthat, knitr
Source code URL https://cran.r-project.org/src/contrib/corrplot_0.84.tar.gz
Maintained Yes

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  • person_outline Taiyun Wei

corrplot citations

 (185)
library_books

Acute Zika Virus Infection in an Endemic Area Shows Modest Proinflammatory Systemic Immunoactivation and Cytokine Symptom Associations

2018
Front Immunol
PMCID: 5943559
PMID: 29774022
DOI: 10.3389/fimmu.2018.00821

[…] cytokine plasma levels in the same subjects in the acute and recovery phases (p-value < 0.05). we used graphpad prism 6.0 software (graphpad software, san diego, ca, usa), r packages “heatmap2,” “corrplot,” and “ggplot” and cytoscape to display the results., to characterize early immune activation during acute zikv infection, we compared the plasma levels of cytokines, chemokines, and growth […]

library_books

Deconvolution of Human Brain Cell Type Transcriptomes Unraveled Microglia Specific Potential Biomarkers

2018
PMCID: 5932158
PMID: 29755398
DOI: 10.3389/fneur.2018.00266

[…] ages spanning prenatal stages like 12 pcw, 37 pcw to postnatal stages, such as 1, 15–19, and 40 years of age. pearson correlation matrices or correlograms were constructed and visualized using the corrplot package of r bioconductor suite. all graphs have been made using rstudio 1.0.153 ()., human embryonic stem cells (h9-hesc, nih approved) were obtained from human embryonic stem cell core, […]

library_books

Ischemic stroke is associated with the pro inflammatory potential of N glycosylated immunoglobulin G

2018
PMCID: 5921323
PMID: 29699572
DOI: 10.1186/s12974-018-1161-1

[…] the index of evaluation was the false discrimination rates, which were used to compare the method of dimension reduction. the internal associations among glycans were analyzed using the r package “corrplot.” a receiver operating characteristic (roc) curve was developed for the calculation of the area under the curve (auc) with a 95% confidence interval (ci)., to investigate the relationship […]

library_books

Automated Morphological Analysis of Microglia After Stroke

2018
PMCID: 5917008
PMID: 29725290
DOI: 10.3389/fncel.2018.00106

[…] analyses and data visualizations were performed in rstudio (rstudio team, ) using r version 3.2.2 (r core team, ) and the packages rocr (sing et al., ), plyr (wickham, ), beeswarm (eklund, ), and corrplot (wei, ). a wilcoxon rank sum test with continuity correction was applied for group comparisons unless otherwise specified in the respective results section., to identify the best features […]

library_books

Assessing Performance of Spore Samplers in Monitoring Aeromycobiota and Fungal Plant Pathogen Diversity in Canada

2018
Appl Environ Microbiol
PMCID: 5930333
PMID: 29475862
DOI: 10.1128/AEM.02601-17

[…] cutoffs (0.8 and 1) based on the pearson residuals of an independence model for double square root-transformed rarefied community (sample size, 1,532). r packages ram (), reshape2 (), lattice (), corrplot (), and ggplot2 () were used for manipulating otu tables and visualization., all its metabarcoding sequences are available through the ncbi sequence read archive (sra) under study accession […]

library_books

Coarse particulate matter (PM2.5–10) in Los Angeles Basin air induces expression of inflammation and cancer biomarkers in rat brains

2018
Sci Rep
PMCID: 5890281
PMID: 29632393
DOI: 10.1038/s41598-018-23885-3

[…] to identify the potential correlations between gene expression (δct) and heavy metal content (ppm), a non-parametric spearman rho correlation was performed and the correlation plot was generated by corrplot package version 0.77 in r v3.3.1. this analysis assesses how well the relationship between two variables can be described using a monotonic function. rho values ≥0.5 and ≤−0.5 with p-values […]


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