Cortex specifications

Information


Unique identifier OMICS_00056
Name Cortex
Alternative names McCortex, cortex_var
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format FASTA, FASTQ, SAM, BAM & CRAM
Operating system Unix/Linux, Mac OS
Programming languages C
License GNU General Public License version 2.0, MIT License
Computer skills Advanced
Version 0.2
Stability Beta
Maintained Yes

Versioning


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Documentation


Maintainer


  • person_outline Isaac Turner <>

Additional information


http://mcveanlab.github.io/mccortex/ Previous version: http://cortexassembler.sourceforge.net/index_cortex_var.html

Publications for Cortex

Cortex institution(s)
Wellcome Trust Centre for Human Genetics, Oxford, UK; Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Oxford, UK; European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK
Cortex funding source(s)
Supported by the Wellcome Trust (grant numbers 090532/Z/09/Z and 100956/Z/13/Z), Wellcome Trust Research Studentship award (097310/Z/11/Z), a PhD studentship from the BBSRC and a Wellcome Trust/Royal Society Sir Henry Dale Fellowship (grant 102541/Z/13/Z).

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