Cortex specifications


Unique identifier OMICS_00056
Name Cortex
Alternative names McCortex, cortex_var
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format FASTA, FASTQ, SAM, BAM & CRAM
Operating system Unix/Linux, Mac OS
Programming languages C
License GNU General Public License version 2.0, MIT License
Computer skills Advanced
Version 0.2
Stability Beta
Maintained Yes


Add your version



  • person_outline Isaac Turner <>

Additional information Previous version:

Publications for Cortex

Cortex institution(s)
Wellcome Trust Centre for Human Genetics, Oxford, UK; Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Oxford, UK; European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK
Cortex funding source(s)
Supported by the Wellcome Trust (grant numbers 090532/Z/09/Z and 100956/Z/13/Z), Wellcome Trust Research Studentship award (097310/Z/11/Z), a PhD studentship from the BBSRC and a Wellcome Trust/Royal Society Sir Henry Dale Fellowship (grant 102541/Z/13/Z).

Cortex reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Cortex