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COSER specifications


Unique identifier OMICS_09217
Alternative name COmpare genomes with SEgmental duplications and Rearrangement
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Windows
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Mingfu Shao <>

Publication for COmpare genomes with SEgmental duplications and Rearrangement

COSER in publications

PMCID: 5886552
PMID: 29590262
DOI: 10.1590/1414-431X20177098

[…] for hpv gene by pcr-multiplex. compared with other brazilian reports that applied pcr-rflp, discrepancies between regions were present. miranda et al. () found 11% positivity for hpv in ouro preto, coser et al. () 15.7% in rio grande do sul, while fernandes et al. () 48% in rio grande do norte. to improve our results, we compared pcr-rflp and papillocheck® microarray. thirty-five percent […]

PMCID: 5613161
PMID: 28983305
DOI: 10.3389/fpls.2017.01626

[…] chris little, kansas state university, united states, this article was submitted to crop science and horticulture, a section of the journal frontiers in plant science, †present address: sara m. coser, monsanto company, são josé dos campos, brazil, charcoal rot (cr) disease caused by macrophomina phaseolina is responsible for significant yield losses in soybean production. among the methods […]

PMCID: 5472596
PMID: 28620159
DOI: 10.1038/s41598-017-03695-9

[…] note: springer nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations., a special thanks to the members of singh lab, particularly sara coser and brain scott for assistance with phenotyping; adam martin-schwarze for assistance with statistical analysis; nick howell, brandon carpenter, and aaron brand for help throughout the growing […]

PMCID: 5466325
PMID: 28598989
DOI: 10.1371/journal.pone.0179191

[…] of bayesian models was checked by inspecting trace plots of variance parameters., we sincerely appreciate the members of singh soybean group at isu, particularly jae brungardt, brian scott and sara coser for assistance with phenotyping; nick howell, brandon carpenter, and aaron brand for help throughout the growing season and greenhouse operations; and stith wiggs for help with inoculation […]

PMCID: 5376558
PMID: 28421060
DOI: 10.3389/fmicb.2017.00568

[…] and two- or three-section projections were made by superimposing representative z-planes to generate the final images., a plasmid construct expressing the fluorescent co sensor protein coser was kindly provided by dr. chuan he (university of chicago, chicago, il, usa). coser is a cpvenus-cooa fusion protein that fluoresces in the presence of co (). the cpvenus moiety […]

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COSER institution(s)
School of Computer and Communication Sciences, EPFL, Lausanne, Switzerland

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