cosmiq statistics

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Citations per year

Number of citations per year for the bioinformatics software tool cosmiq
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Tool usage distribution map

This map represents all the scientific publications referring to cosmiq per scientific context
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Associated diseases

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Popular tool citations

chevron_left Chromatogram alignment Peak detection Metabolite quantification Lipid quantification Peak detection Chromatogram alignment chevron_right
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cosmiq specifications

Information


Unique identifier OMICS_30345
Name cosmiq
Alternative name COmbining Single Masses Into Quantities
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data The faah knockout dataset.
Output data A xcms set object.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.13.0
Stability Stable
Requirements
BiocGenerics, pracma, BiocStyle, Rcpp, RUnit, xcms, faahKO, R(>=3.0.2), MassSpecWavelet
Maintained Yes

Download


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Versioning


No version available

Documentation


Maintainers


  • person_outline Christian Panse
  • person_outline David Fischer

Additional information


http://bioconductor.org/packages/release/bioc/vignettes/cosmiq/inst/doc/cosmiq.pdf

cosmiq citation

library_books

From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics

2017
GigaScience
PMCID: 5499862
PMID: 28520864
DOI: 10.1093/gigascience/gix037

[…] le Annotation; CDF: common data format; CFM-ID: Competitive Fragmentation Modeling for Metabolite Identification; ChEBI: Chemical Entities of Biological Interest; CID: collision-induced dissociation; cosmiq: combining single masses into quantities; COVAIN: Covariance Inverse; CRAN: Comprehensive R Archive Network; CSI: FingerID: compound structure identification: FingerID; CTS: Chemical Translatio […]


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