cosmiq statistics

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Citations per year

Number of citations per year for the bioinformatics software tool cosmiq

Tool usage distribution map

This map represents all the scientific publications referring to cosmiq per scientific context
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Associated diseases


Popular tool citations

chevron_left Chromatogram alignment Peak detection Metabolite quantification Lipid quantification Peak detection Chromatogram alignment chevron_right
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cosmiq specifications


Unique identifier OMICS_30345
Name cosmiq
Alternative name COmbining Single Masses Into Quantities
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data The faah knockout dataset.
Output data A xcms set object.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.13.0
Stability Stable
BiocGenerics, pracma, BiocStyle, Rcpp, RUnit, xcms, faahKO, R(>=3.0.2), MassSpecWavelet
Maintained Yes




No version available



  • person_outline Christian Panse
  • person_outline David Fischer

Additional information

cosmiq citation


From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics

PMCID: 5499862
PMID: 28520864
DOI: 10.1093/gigascience/gix037

[…] le Annotation; CDF: common data format; CFM-ID: Competitive Fragmentation Modeling for Metabolite Identification; ChEBI: Chemical Entities of Biological Interest; CID: collision-induced dissociation; cosmiq: combining single masses into quantities; COVAIN: Covariance Inverse; CRAN: Comprehensive R Archive Network; CSI: FingerID: compound structure identification: FingerID; CTS: Chemical Translatio […]

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