COSMOS specifications

Information


Unique identifier OMICS_11118
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Paired-end reads from normal and tumor samples, sorted BAM files (normal.bam, tumor.bam and their indices (.bam.bai)) containing mapped results of the reads on your reference genome
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Requirements PySam
Maintained Yes

Versioning


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Maintainer


  • person_outline Jun Sese <>

COSMOS article

COSMOS institution(s)
Biotechnology Research Institute for Drug Discovery, National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan; Department of Genome Biology, Graduate School of Medicine, Osaka University, Osaka, Japan; Artificial Intelligence Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan
COSMOS funding source(s)
Japan Society for the Promotion of Science (JSPS) KAKENHI [24240044, 25125709, 15H01717, 25125714, 221S0002]; Grant-in-Aid for Scientific Research on InnovativeArea "Genome Science", Ministry of Education, Culture, Sports, Science and Technology in Japan

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