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- person_outline Cosmosid Team
Comprehensive benchmarking and ensemble approaches for metagenomic classifiers
[…] Some authors (listed above) are members of commercial operations in metagenomics, including IBM, CosmosID, Biotia, and One Codex. […]
Metagenomic analysis of an ecological wastewater treatment plant’s microbial communities and their potential to metabolize pharmaceuticals
[…] establish a minimum support threshold (or false-positive cut-off) for taxonomic profiling. One control dataset is comprised of single-end Illumina reads from a synthetic microbial sample prepared by CosmosID. This constructed freshwater sample simulates organisms found in the Delaware River and is described here: http://www.cosmosid.net/constructed-freshwater. The second control dataset is single […]
Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing
[…] dren’s Hospital (NCH) Biomedical Genomics Core (Columbus, Ohio) using the TruSeq SBS Kit v3 reagents (Illumina) for paired end sequencing with read lengths of 100 base pairs (bps) (200 cycles) and at CosmosID with an Illumina GAIIx for 150 base pairs (bps) single read using the TruSeq SBS Kit v5 reagents (Illumina). Primary analysis (image analysis and basecalling) were performed using HiSeq Contr […]
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