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CPPsite specifications

Information


Unique identifier OMICS_05163
Name CPPsite
Restrictions to use None
Version 2.0
Maintained Yes

Maintainer


Publications for CPPsite

CPPsite citations

 (3)
library_books

SkipCPP Pred: an improved and promising sequence based predictor for predicting cell penetrating peptides

2017
BMC Genomics
PMCID: 5657092
DOI: 10.1186/s12864-017-4128-1

[…] was derived from the transcription activator of human immunodeficiency virus type 1 in the late 1980s []. Since the discovery of Tat, hundreds of CPPs have been identified. The CPP-specific database CPPsite2.0 [] currently contains 1850 experimentally validated CPPs, nearly double the contents of the previous version (CPPsite) []. As reported in [], most of the known true CPPs are derived from na […]

library_books

Effective Design of Multifunctional Peptides by Combining Compatible Functions

2016
PLoS Comput Biol
PMCID: 4838304
PMID: 27096600
DOI: 10.1371/journal.pcbi.1004786

[…] t, www.dlib.net). For CPP and CPP efficiency classification we used data sets obtained from http://www.imtech.res.in/raghava/cellppd/dataset.php. In particular, the data set for CPPs consisted of the CPPSite1, Sanders and Dobchev sets []. The membrane-binding data set was obtained from a previously published list of trans-membrane protein fragments []. All training sets are also available in the G […]

library_books

Identification of a Short Cell Penetrating Peptide from Bovine Lactoferricin for Intracellular Delivery of DNA in Human A549 Cells

2016
PLoS One
PMCID: 4778846
PMID: 26942714
DOI: 10.1371/journal.pone.0150439

[…] amino acids in length were identified and found to be able to deliver a wide range of biological cargos into cells []. Approximately 1,700 CPP sequences have been identified and collected in database CPPsite 2.0 [] (http://crdd.osdd.net/raghava/cppsite/). The CPPpred (http://bioware.ucd.ie/~compass/biowareweb/Server_pages/cpppred.php) and CellPPD (http://crdd.osdd.net/raghava/cellppd/submission.ph […]

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CPPsite institution(s)
Bioinformatics Centre, CSIR-Institute of Microbial Technology, Chandigarh, India

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