CPTRA specifications

Information


Unique identifier OMICS_01303
Name CPTRA
Alternative name Cross Platform Transcriptome Analysis
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data An annotated long read sequence and short sequence tags.
Output data Some tag alignment result files and GO categorization results.
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability No
Maintained No

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Publication for Cross Platform Transcriptome Analysis

CPTRA institution(s)
Institute of Plant Genomics and Biotechnology, Texas A&M University, College Station, TX, USA; State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, China; Monsanto Co., Saint Louis, MO, USA; Department of Plant Sciences, University of Tennessee, Knoxville, TN, USA; Department of Crop Sciences, University of Illinois, Urbana Champion, IL, USA; Department of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, USA
CPTRA funding source(s)
Supported by Texas Agrilife Research and Monsanto Inc.

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