CRDOCK specifications
Information
| Unique identifier | OMICS_08209 |
|---|---|
| Name | CRDOCK |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux |
| Computer skills | Advanced |
| Stability | Stable |
| Maintained | No |
Versioning
No version available
Publication for CRDOCK
CRDOCK citations
(2)Deciphering how Cpl 7 cell wall binding repeats recognize the bacterial peptidoglycan
[…] the most probable binding cavity. Next, and to cover the widest range of possible solutions compatible with STD data, docking programs that use different docking and scoring algorithms were employed: CRDOCK, DOCK6.3, AutoDock4.2 and AutoDock Vina (see Supplementary information). After default evaluation by the respective methods, the best scored solutions were carefully analyzed using the STD data […]
Esterase LpEst1 from Lactobacillus plantarum: A Novel and Atypical Member of the αβ Hydrolase Superfamily of Enzymes
[…] rges and parameters from the Merck molecular force field 94 using the openbabel tool. Energetically favoured binding poses for these substrates within the active site were found by using our in-house CRDOCK tool . Briefly, for each substrate a conformational search was performed and exhaustive sampling was achieved using the AMBER force field for intermolecular energy evaluation and the BFGS algor […]
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