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Create Epitome

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Models genetic diversity by summarizing a large input dataset into an epitome, a short sequence capturing many overlapping subsequences from the dataset. Create Epitome is an interactive program (created via Silverlight) and a command-line program for Windows. Given a weighted set of amino-acid sequences, it creates a new amino-acid sequence that covers input sequences. It works step-by-step, producing an output line after each step. The possible steps include: combining two input sequences that overlap, adding an input sequence to an output component with which it overlap, combining two output components that overlap.

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Create Epitome classification

Create Epitome specifications

Interface:
Web user interface
Computer skills:
Basic
Requirements:
Microsoft Silverlight
Restrictions to use:
None
Stability:
Stable
Maintained:
Yes

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Create Epitome classification

Create Epitome specifications

Software type:
Package/Module
Restrictions to use:
None
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
Interface:
Command line interface
Operating system:
Windows
Version:
1.0.0.1
Requirements:
Visual Studio, Silverlight Tools, .Net Framework

Create Epitome distribution

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Create Epitome support

Maintainer

  • David Heckerman <>
  • David Heckerman <>

Credits

Institution(s)

Microsoft Research, Redmond, WA, USA

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