CRISP specifications

Information


Unique identifier OMICS_00057
Name CRISP
Alternative name Comprehensive Read analysis for Identification of Single Nucleotide Polymorphisms
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format BAM
Output data Single file with information about the variants and the genotypes (or allele frequencies) for each pool or sample
Output format VCF
Operating system Unix/Linux
Programming languages C
Computer skills Advanced
Stability Stable
Maintained Yes

Subtool


  • piCALL

Versioning


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Maintainer


  • person_outline Vikas Bansal <>

Publications for Comprehensive Read analysis for Identification of Single Nucleotide Polymorphisms

CRISP institution(s)
Scripps Genomic Medicine, Scripps Translational Science Institute, La Jolla, CA, USA
CRISP funding source(s)
Scripps Translational Science Institute Clinical Translational Science Award (National Institutes of Health U54RR02504-01)

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