CRISPR-Analyser protocols

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CRISPR-Analyser specifications

Information


Unique identifier OMICS_16954
Name CRISPR-Analyser
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C, C++, Perl
License MIT License
Computer skills Advanced
Stability Stable
Maintained Yes

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  • person_outline David Parry-Smith <>

CRISPR-Analyser in pipeline

2017
PMCID: 5333799
PMID: 28253259
DOI: 10.1371/journal.pcbi.1005341

[…] and noncoding, introns and exons), in addition to 100 kb up- and downstream, were subtracted. random locations were selected within the remaining regions., off-target analysis was performed using crispr-analyser []. we searched for all canonical pam regions (ngg) in the genome and stored the 20nt that precedes each. then using “search” and “align” options we obtained the number of off-targets […]


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CRISPR-Analyser in publication

PMCID: 5333799
PMID: 28253259
DOI: 10.1371/journal.pcbi.1005341

[…] and noncoding, introns and exons), in addition to 100 kb up- and downstream, were subtracted. random locations were selected within the remaining regions., off-target analysis was performed using crispr-analyser []. we searched for all canonical pam regions (ngg) in the genome and stored the 20nt that precedes each. then using “search” and “align” options we obtained the number of off-targets […]


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