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CRISPR/Cas9 databases | Genome engineering

The simplicity of site-specific genome targeting by type II clustered, regularly interspaced, short palindromic repeat (CRISPR)-Cas9 nucleases, along with their robust activity profile, has changed the landscape of genome editing. These favorable…
GenomeCRISPR
Dataset

GenomeCRISPR

A database for high-throughput CRISPR/Cas9 screening experiments. GenomeCRISPR…

A database for high-throughput CRISPR/Cas9 screening experiments. GenomeCRISPR contains data on the performance of more than 550 000 single guide RNAs (sgRNAs) which were used in >80 different…

CRISPRz
Dataset

CRISPRz

A database of CRISPR/Cas9 target sequences that have been experimentally…

A database of CRISPR/Cas9 target sequences that have been experimentally validated in zebrafish. CRISPRz can be searched using multiple inputs such as ZFIN IDs, accession number, UniGene ID, or gene…

Grape-CRISPR
Dataset

Grape-CRISPR

Facilitates the use of the CRISPR/Cas9 system as a genome editing tool for…

Facilitates the use of the CRISPR/Cas9 system as a genome editing tool for functional studies and molecular breeding of grapes. Among other functions, the Grape-CRISPR database allows users to…

PICKLES
Dataset

PICKLES Pooled In-vitro CRISPR Knockout Library Essentiality Screens

Offers Pooled In vitro CRISPR Knockout Library Essentiality Screens. PICKLES…

Offers Pooled In vitro CRISPR Knockout Library Essentiality Screens. PICKLES allows exploration of gene essentiality profiles of users’ favourite genes across a large set of CRISPR knockout and…

Anti-CRISPRdb
Dataset

Anti-CRISPRdb

Provides access to data about anti-CRISPR proteins. Anti-CRISPRdb is an online…

Provides access to data about anti-CRISPR proteins. Anti-CRISPRdb is an online resource that contains more than 400 anti-CRISPR proteins tested by experimental and bioinformatics methods. The…

WGE
Dataset

WGE Wellcome Trust Sanger Institute Genome Editing database

Uses methods to compute, visualize and select optimal CRISPR sites in a genome…

Uses methods to compute, visualize and select optimal CRISPR sites in a genome browser environment. The WGE database currently stores single and paired CRISPR sites and pre-calculated off-target…

EENdb
Dataset

EENdb

A database collecting reported TALENs, ZFNs and CRISPR/Cas systems targeting…

A database collecting reported TALENs, ZFNs and CRISPR/Cas systems targeting organism.

CRISPy
Dataset

CRISPy

Allows rapid identification of sgRNA target sequences in the Chinese hamster…

Allows rapid identification of sgRNA target sequences in the Chinese hamster ovary (CHO-K1) genome. The CRISPy tool identified 1,970,449 CRISPR targets divided into 27,553 genes and lists the number…

CrisprGE
Web

CrisprGE

A central hub of CRISPR/Cas-based genome editing. Presently, this database…

A central hub of CRISPR/Cas-based genome editing. Presently, this database holds a total of 4680 entries of 223 unique genes from 32 model and other organisms. It encompasses information about the…

CRISPR…
Dataset

CRISPR Knockout Guide Designer

Allows users to search from over 100,000 genomes and 9,000 species in order to…

Allows users to search from over 100,000 genomes and 9,000 species in order to make a Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) guide for gene knockout. CRISPR Knockout Guide…

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