CRISPR-DS specifications

Unique identifier:
OMICS_22928
Interface:
Command line interface
Input format:
FASTQ
Operating system:
Unix/Linux
License:
BSD 3-clause “New” or “Revised” License
Version:
1.0
Maintained:
Yes
Software type:
Pipeline/Workflow
Restrictions to use:
None
Output format:
FASTQ,BAM,MUTPOS
Programming languages:
Python, Shell (Bash)
Computer skills:
Advanced
Stability:
Stable

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CRISPR-DS distribution

download

CRISPR-DS support

Maintainers

  • Scott Kennedy <>
  • Rosa Risques <>

forum

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Credits

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Publications

Institution(s)

Department of Pathology, University of Washington, Seattle, WA, USA; Department of Pathology, Key Laboratory of Carcinogenesis and Translational Research, Peking University Cancer Hospital and Institute, Beijing, China; Department of Medicine, Division of Hematology and Oncology, University of Washington, Seattle, WA, USA; TwinStrand Biosciences, Seattle, WA, USA

Funding source(s)

Supported by grants from the NIH under award numbers R01CA160674 and R01CA181308; Mary Kay Foundation grant 045-15; and Cooperative Agreement Number W911NF-15-2-0127 from the U.S. Army Research Office and the Defense Forensic Science Center (DFSC).

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