CRISPR-DS specifications

Information


Unique identifier OMICS_22928
Name CRISPR-DS
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input format FASTQ
Output format FASTQ,BAM,MUTPOS
Operating system Unix/Linux
Programming languages Python, Shell (Bash)
License BSD 3-clause “New” or “Revised” License
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes

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Maintainers


  • person_outline Scott Kennedy <>
  • person_outline Rosa Risques <>

CRISPR-DS article

CRISPR-DS institution(s)
Department of Pathology, University of Washington, Seattle, WA, USA; Department of Pathology, Key Laboratory of Carcinogenesis and Translational Research, Peking University Cancer Hospital and Institute, Beijing, China; Department of Medicine, Division of Hematology and Oncology, University of Washington, Seattle, WA, USA; TwinStrand Biosciences, Seattle, WA, USA
CRISPR-DS funding source(s)
Supported by grants from the NIH under award numbers R01CA160674 and R01CA181308; Mary Kay Foundation grant 045-15; and Cooperative Agreement Number W911NF-15-2-0127 from the U.S. Army Research Office and the Defense Forensic Science Center (DFSC).

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