CRISPR-GA specifications

Unique identifier:
OMICS_05089
Interface:
Web user interface
Input data:
The user is only required to use polymerase chain reaction (PCR) to amplify the area of the genome to analyze. This amplified library is sequenced with an Illumina Miseq Machine (other platforms may also be used). The user provides to the pipeline CRISPR-GA, the next-generation sequencing obtained reads, the intended editing sequence and the original sequence.
Computer skills:
Basic
Maintained:
Yes
Name:
CRISPR Genome Analyzer
Restrictions to use:
None
Output data:
CRISPR-GA will estimate the HR (normally associated with intended edits), non-homologous end-joining (NHEJ, normally associated with non-desired edits) and a complete report of the location and characteristics of the indels.
Stability:
Stable

CRISPR-GA support

Maintainer

  • George M. Church <>

forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Department of Genetics, Harvard Medical School, Boston, MA, USA

Funding source(s)

CEGS grant (Centers of Excellence in Genomic Science, grant number HG005550, National Institutes of Health); a Human Frontiers Science Program Long Term Fellowship

User review

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

Related Tools