CRT specifications

Information


Unique identifier OMICS_03713
Name CRT
Alternative name CRISPR Recognition Tool
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Input format FASTA
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Stability Stable
Maintained Yes

Taxon


  • Archaebacteria
  • Eubacteria

Versioning


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Maintainer


  • person_outline Charles Bland <>

CRT article

CRT citation

2017
PMCID: 5609589

[…] rooted trees. gene prediction and functional annotation were achieved by using prodigal v2.6 (hyatt et al., 2010), trnascan v1.4 (lowe and eddy, 1997), rnammer v1.2 (lagesen et al., 2007), crispr recognition tool (crt) (bland et al., 2007), kegg automatic annotation system (moriya et al., 2007), cazy database (lombard et al., 2014), smart database (letunic et al., 2014), and cat server […]

CRT institution(s)
Department of Computer Science, Jackson State University, Jackson, MS, USA; DOE Joint Genome Institute, Walnut Creek, CA, USA; Department of Computer Science and Engineering, University of Nebraska-Lincoln, Lincoln, NE, USA

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