CRISPRDetect specifications

Information


Unique identifier OMICS_12234
Name CRISPRDetect
Interface Web user interface
Restrictions to use None
Programming languages Perl
Computer skills Basic
Version 2.1
Stability Stable
Maintained Yes

Taxon


  • Eubacteria

Documentation


Maintainer


Information


Unique identifier OMICS_12234
Name CRISPRDetect
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Version 2.1
Stability Stable
Maintained Yes

Taxon


  • Eubacteria

Versioning


Add your version

Documentation


Maintainer


CRISPRDetect article

CRISPRDetect citation

2017
PMCID: 5382924

[…] of leader and repeat regions have been developed (alkhnbashi et al., 2016; biswas et al., 2016). for a selected subset, we compared the orientation of leader sequences and repeats as predicted by crisprdetect tool (biswas et al., 2016) and our results, and saw agreement between the methods., we used muscle with its default settings (edgar, 2004) to perform all the sequence alignments […]

CRISPRDetect institution(s)
Department of Biochemistry, University of Otago, Dunedin, New Zealand; Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand; Genetics Otago, University of Otago, Dunedin, New Zealand

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