CRISPRone specifications
Information
| Unique identifier | OMICS_15622 |
|---|---|
| Name | CRISPRone |
| Interface | Web user interface |
| Restrictions to use | None |
| Input data | Users can upload a sequence file. As an option, he can also provide gene information. |
| Input format | FASTA, GFF |
| Output data | CRISPRone will report the CRISPR-Cas system prediction results for each sequence. A sequence may contain both CRISPR array(s) and cas genes, or CRISPR array(s) only, or cas gene(s) only, or none of them. |
| Output format | TXT |
| Computer skills | Basic |
| Stability | Stable |
| Maintained | Yes |
Documentation
- Documentation: http://omics.informatics.indiana.edu/CRISPRone/help.php
Maintainer
- person_outline Yuzhen Ye <>
CRISPRone article
library_books
Not all predicted CRISPR-Cas systems are equal: isolated cas genes and classes of CRISPR like elements.
2017 BMC Bioinformatics
PMID: 28166719
DOI: 10.1186/s12859-017-1512-4
CRISPRone institution(s)
School of Informatics and Computing, Indiana University, Bloomington, IN, USA
CRISPRone funding source(s)
This work has been supported by the National Science Foundation (grant number: DBI-1262588) and National Institutes of Health (grant number: 1R01AI108888).
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