CrispRVariants specifications

Information


Unique identifier OMICS_12975
Name CrispRVariants
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Input data Set of sequences aligned to a reference genome
Input format BAM, AB1, FASTQ
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 3.3
Stability Stable
Requirements ggplot2
Maintained Yes

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Documentation


Maintainer


  • person_outline Helen Lindsay <>

Information


Unique identifier OMICS_12975
Name CrispRVariants
Interface Web user interface
Restrictions to use None
Input data Set of sequences aligned to a reference genome
Input format BAM, AB1, FASTQ
Programming languages R
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Helen Lindsay <>

Publication for CrispRVariants

CrispRVariants institution(s)
Institute of Molecular Life Sciences, University of Zurich, Zurich, Switzerland; SIB Swiss Insitute of Bioinformatics, University of Zurich, Zurich, Switzerland; Institute of Biochemistry, University of Zurich, Zurich, Switzerland
CrispRVariants funding source(s)
This project was supported by the Canton of Zürich, a Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (SNSF) professorship (PP00P3_139093), a Marie Curie Career Integration Grant from the European Commission, and a Schweizerische Herzstiftung grant; European Research Council Starting Grant ANTIVIRNA (337284) and an SNSF Project Grant (31003A_149393); a European Commission 7th Framework Collaborative Project RADIANT grant (agreement number 305626) and an SNSF Project Grant (31003A_143883); a Universität Zürich (UZH) URPP Translational Cancer Research Seed Grant; and a UZH Forschungskredit.

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