CrispRVariants specifications

Unique identifier:
OMICS_12975
Restrictions to use:
None
Input format:
BAM, AB1, FASTQ
Computer skills:
Basic
Maintained:
Yes
Interface:
Web user interface
Input data:
Set of sequences aligned to a reference genome
Programming languages:
R
Stability:
Stable

CrispRVariants specifications

Unique identifier:
OMICS_12975
Interface:
Command line interface
Input data:
Set of sequences aligned to a reference genome
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 2.0
Version:
3.3
Requirements:
ggplot2
Software type:
Toolkit/Suite
Restrictions to use:
None
Input format:
BAM, AB1, FASTQ
Programming languages:
R
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

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CrispRVariants distribution

download

CrispRVariants support

Documentation

Maintainer

  • Helen Lindsay <>
  • Helen Lindsay <>

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Credits

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Publications

Institution(s)

Institute of Molecular Life Sciences, University of Zurich, Zurich, Switzerland; SIB Swiss Insitute of Bioinformatics, University of Zurich, Zurich, Switzerland; Institute of Biochemistry, University of Zurich, Zurich, Switzerland

Funding source(s)

This project was supported by the Canton of Zürich, a Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (SNSF) professorship (PP00P3_139093), a Marie Curie Career Integration Grant from the European Commission, and a Schweizerische Herzstiftung grant; European Research Council Starting Grant ANTIVIRNA (337284) and an SNSF Project Grant (31003A_149393); a European Commission 7th Framework Collaborative Project RADIANT grant (agreement number 305626) and an SNSF Project Grant (31003A_143883); a Universität Zürich (UZH) URPP Translational Cancer Research Seed Grant; and a UZH Forschungskredit.

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