CrossTalkZ specifications

Information


Unique identifier OMICS_10082
Name CrossTalkZ
Software type Package/Module
Interface Command line interface
Restrictions to use None
Output data z-score, p-value, false discovery rate, a test of normality for the N/A distributions
Operating system Unix/Linux
Programming languages C
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Maintainer


  • person_outline Erik Sonnhammer <>

Publication for CrossTalkZ

CrossTalkZ in publication

PMCID: 3245127
PMID: 22110034
DOI: 10.1093/nar/gkr1062

[…] obtained by complementary approaches, and one wants to test the hypothesis that they are significantly related. this can currently not be done statistically on the website, but a new separate tool crosstalkz can perform such tests., enter gene set identifiers (many types are supported) into the query box., set network distance to 0 and confidence cut-off to 0.5., run query. if the subnetwork […]


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CrossTalkZ institution(s)
Stockholm Bioinformatics Centre, Science for Life Laboratory, Solna, Sweden; Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden

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