CSAH specifications

Information


Unique identifier OMICS_16357
Name CSAH
Alternative name Charged Single α-Helices
Interface Web user interface
Restrictions to use None
Input data A protein sequence.
Input format FASTA
Output data The sequence with CSAHs highlighted in bold capitals and coloring of charged residues.
Output format CSV, FASTA
Programming languages Perl
Computer skills Basic
Version 2.0
Stability Stable
Maintained Yes

Maintainer


  • person_outline Zoltan Gaspari <>

Information


Unique identifier OMICS_16357
Name CSAH
Alternative name Charged Single α-Helices
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Input data A protein sequence.
Input format FASTA
Output data The sequence with CSAHs highlighted in bold capitals and coloring of charged residues.
Output format CSV, FASTA
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Version 2.0
Stability Stable
Requirements Perl libraries, Math:FFT module
Maintained Yes

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Maintainer


  • person_outline Zoltan Gaspari <>

Publication for Charged Single α-Helices

CSAH institution(s)
Institute of Chemistry, Eötvös Loránd University, Budapest, Hungary; Department of Biochemistry, Eötvös Loránd University, Budapest, Hungary; ELTE-HAS Protein Modelling Group, Budapest, Hungary; Agricultural Biotechnology Center, Gödöll, Hungary
CSAH funding source(s)
This work was supported by grants from the Hungarian Scientific Research Fund (OTKA F68079, K72973, K61784, NI68466, NK81950), by the International Centre for Genetic Engineering and Biotechnology (CRP/HUN09-03), by the European Union and the European Social Fund under the grant agreement no. TÁMOP 4.2.1./B-09/1/KMR-2010-0003, by a János Bolyai Research Fellowship and a Ferenc Deák Fellowship.

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